Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907748.1_cds_XP_016457871.1_51553
CDS Infomation

[gene=LOC107781650] [db_xref=GeneID:107781650] [protein=patellin-3-like] [protein_id=XP_016457871.1] [location=complement(join(17781..18035,18196..18346,18462..18586,19273..20313))] [gbkey=CDS]
Sequence

ATGGCTGATACAGCCCCAACTGAACATACCCTTCAGCCACCATCCACGGCTGAAGAAGAT
ACCCCACCCCCACCTCCACCACCAGCAGTAGAACCAGCAGCTACTGAACCACCTCTTGCT
TCAGTTGAAGTTGAACCAGTGAAGCAAGAATCAGTAACAGAAGCTGAGGAACATCACCCT
GCTGTTACTGTAGTTGAAAAGGATACTCCTTTAACTGAGCCTCCACCGGAAGAACCAACT
CTGGTTGCAGCTGAACAGGTCTCTGTTACTGTTCCTGAGAAAGAAGCAGAGGGTGTTAGT
GTTGCTGAATCTGACAAATCTAAACCAGCTGATGTGAAAAAGATCCCTGAATCTTTGGTT
TCATTCAAAGAAGAAAGCAACATAGTCTCAGATCTATCTGATTCTGAGAGAAAATCACTT
GAAGAGCTCAAATTTCTTGTTCAAGAATCCATTAAAAATCAAACCTTTACTACTGGAACC
CCAGCTAAAACCCAAGAAATTCAAACCCCATCAACAGAAATTACTGATTTGCCTCAGGAA
GTATCCATTTGGGGAGTGCCACTATTGAAAGATGATAGGACAGATGTGATTCTGCTCAAG
TTTCTTAGAGCTAGAGATTTCAAGATTAAGGAGTCATTTGCAATGTTAAAGAAGACAATT
ATATGGAGAAAAGAGTTTAACATTGAAGAGCTTGTAGATGAAGATCTTGGAGATGATCTT
GATAAGGTTGTGTTTATGCATGGTCATGACAAAGAGGGACATCCTGTTTGCTATAATGTG
TATGGGGAGTTTCAGAATAAGGAATTGTATAACAAAACCTTTGGAGATGAAGAGAAGAGG
AACAAGTTCTTGCGCTGGCGGATTCAGTTCTTGGAGAGAAGTATAAGGAAGTTGGATTTC
AATCCAGGTGGAATCAATACTATCTTTCAAGTTAGTGATCTCAAGAACTCTCCTGGTCCA
GGGAAAAGGGAGCTTCGACTTGCTACTAGGCAGGCCTTGCATTTGCTTCAGGATAATTAT
CCTGAGTTCGTGGCGAAGCAGGTGTTCATCAACGTCCCTTGGTGGTATTTAGCTTTCTAC
ACAATGATCAGCCCATTCATGACCCAGAGAACAAAAAGCAAGTTTGTATTTGCTGGTCCA
TCCAAGACTGCAGAAACCCTCTACAAGTATGTATCTCCTGAGCAAGTACCTGTTCAATAT
GGGGGCCTCAGCGTCGATTACTGTGAATGCAATCCTGAGTTCACTGTCAATGATCCAGCC
ACAGAGATCATTGTAAAACCTGCAACAAAGCAGACCGTGGAGATCATTGTAAATGAGAAA
TGCATTATTGTCTGGGAGCTACGTGTATTGGGTTGGGAGGTGACTTATAGTGCTGAATAT
GTGCCGAATACAGACAGTGGATATACTGTTAACATACAGAAGCCTAGGAAGATGACCCCA
ACTGATGAACCTGTTGTTAGCAGCAGCTTCAAGATCGTTGAGCTAGGTAAGATACTGTTG
ACGATTGACAATCCCACGTCAAAGAAGAAGAAGCTTCTTTACAGGTACAAGGATAAGCCC
TATTCTGACTGA

Peptide Sequence

PEP ID

XP_016457871.1
PEP Infomation

PREDICTED: patellin-3-like [Nicotiana tabacum]
Sequence

MADTAPTEHTLQPPSTAEEDTPPPPPPPAVEPAATEPPLASVEVEPVKQESVTEAEEHHP
AVTVVEKDTPLTEPPPEEPTLVAAEQVSVTVPEKEAEGVSVAESDKSKPADVKKIPESLV
SFKEESNIVSDLSDSERKSLEELKFLVQESIKNQTFTTGTPAKTQEIQTPSTEITDLPQE
VSIWGVPLLKDDRTDVILLKFLRARDFKIKESFAMLKKTIIWRKEFNIEELVDEDLGDDL
DKVVFMHGHDKEGHPVCYNVYGEFQNKELYNKTFGDEEKRNKFLRWRIQFLERSIRKLDF
NPGGINTIFQVSDLKNSPGPGKRELRLATRQALHLLQDNYPEFVAKQVFINVPWWYLAFY
TMISPFMTQRTKSKFVFAGPSKTAETLYKYVSPEQVPVQYGGLSVDYCECNPEFTVNDPA
TEIIVKPATKQTVEIIVNEKCIIVWELRVLGWEVTYSAEYVPNTDSGYTVNIQKPRKMTP
TDEPVVSSSFKIVELGKILLTIDNPTSKKKKLLYRYKDKPYSD

Transcript Sequence

Gene sequence data has not been registered.